Small ribosomal subunit protein uS12
Also known as: RPS23
Function
Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through a tunnel in the LSU and interact with protein factors that function in enzymatic processing, targeting, and the membrane insertion of nascent chains at the exit of the ribosomal tunnel. Plays an important role in translational accuracy. Part of the small subunit (SSU) processome, first precursor of the small eukaryotic ribosomal subunit. During the assembly of the SSU processome in the nucleolus, many ribosome biogenesis factors, an RNA chaperone and ribosomal proteins associate with the nascent pre-rRNA and work in concert to generate RNA folding, modifications, rearrangements and cleavage as well as targeted degradation of pre-ribosomal RNA by the RNA exosome.
Classification
- Family (Pfam)
- PF00164 Ribosom_S12_S23
- InterPro
- NA-bd_OB-fold, Ribosomal_uS12, Ribosomal_uS12_euk_arc
- Functional cluster
- Mixed Regulatory & Membrane Proteins
Experimental structures · PDB · 171
- 4CXG EM 8.70A
- 4CXH EM 8.90A
- 4UG0 EM
- 4V6X EM 5.00A
- 5A2Q EM 3.90A
- 5AJ0 EM 3.50A
- 5FLX EM 3.90A
- 5LKS EM 3.60A
- 5OA3 EM 4.30A
- 5T2C EM 3.60A
- 5VYC X-ray 6.00A
- 6FEC EM 6.30A
- … and 159 more
A predicted model is available from AlphaFold.
Gene Ontology · 17
- GO:0005737 cytoplasm
- GO:0005829 cytosol
- GO:0022626 cytosolic ribosome
- GO:0022627 cytosolic small ribosomal subunit
- GO:0016020 membrane
- GO:0005654 nucleoplasm
- GO:0005840 ribosome
- GO:0005791 rough endoplasmic reticulum
- GO:0032040 small-subunit processome
- GO:0045202 synapse
- GO:0003723 RNA binding
- GO:0003735 structural constituent of ribosome
- GO:0002181 cytoplasmic translation
- GO:1990145 maintenance of translational fidelity
- GO:0042274 ribosomal small subunit biogenesis
- GO:0034063 stress granule assembly
- GO:0006412 translation
Disease associations
- brachycephaly, trichomegaly, and developmental delay MONDO:0044311
Drugs targeting this protein · 2
- CYCLOHEXIMIDE inhibitor
- ATALUREN modulator
Related proteins · sequence + function similarity
- Small ribosomal subunit protein uS12 1.00
- Small ribosomal subunit protein uS12 1.00
- Small ribosomal subunit protein uS12 1.00
- Small ribosomal subunit protein uS12 1.00
- Small ribosomal subunit protein uS12 1.00
- Small ribosomal subunit protein uS12 0.99
- Small ribosomal subunit protein uS12 0.98
- Small ribosomal subunit protein uS12 0.97
- Small ribosomal subunit protein uS12 0.96
- Small ribosomal subunit protein uS12 0.94
- Small ribosomal subunit protein uS12 0.94
- Small ribosomal subunit protein uS12 0.94
Co-cited proteins · studied together in the literature
- Prolyl 3-hydroxylase OGFOD1 2 shared papers
- Small ribosomal subunit protein uS12B 1 shared papers
- Small ribosomal subunit protein uS12A 1 shared papers
- Small ribosomal subunit protein eS21 4 shared papers
- Small ribosomal subunit protein eS28 4 shared papers
- Small ribosomal subunit protein uS14 4 shared papers
- Large ribosomal subunit protein eL36 2 shared papers
- Large ribosomal subunit protein eL34 3 shared papers
- Small ribosomal subunit protein uS12B 1 shared papers
- Prolyl 3,4-dihydroxylase OGFOD1 1 shared papers
- Prolyl 3,4-dihydroxylase ofd1 1 shared papers
- Small ribosomal subunit protein eS26 3 shared papers
Literature · 16 cited papers
- Nucleolar maturation of the human small subunit processome. Science · 2021
- A ribosomopathy reveals decoding defective ribosomes driving human dysmorphism. Am. J. Hum. Genet. · 2017
- Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation. Nat. Struct. Mol. Biol. · 2017
- Structural snapshots of actively translating human ribosomes. Cell · 2015
- N-terminome analysis of the human mitochondrial proteome. Proteomics · 2015
- Structure of the human 80S ribosome. Nature · 2015
- Hydroxylation of the eukaryotic ribosomal decoding center affects translational accuracy. Proc. Natl. Acad. Sci. U.S.A. · 2014
- OGFOD1 catalyzes prolyl hydroxylation of RPS23 and is involved in translation control and stress granule formation. Proc. Natl. Acad. Sci. U.S.A. · 2014
- A new system for naming ribosomal proteins. Curr. Opin. Struct. Biol. · 2014
- Structures of the human and Drosophila 80S ribosome. Nature · 2013
- Initial characterization of the human central proteome. BMC Syst. Biol. · 2011
- Lysine acetylation targets protein complexes and co-regulates major cellular functions. Science · 2009
- … and 4 more in the literature graph