Presenilin-1
Also known as: AD3, PS1, PSEN1, PSNL1
Function
Catalytic subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors and APP (amyloid-beta precursor protein). Requires the presence of the other members of the gamma-secretase complex for protease activity. Plays a role in Notch and Wnt signaling cascades and regulation of downstream processes via its role in processing key regulatory proteins, and by regulating cytosolic CTNNB1 levels. Stimulates cell-cell adhesion via its interaction with CDH1; this stabilizes the complexes between CDH1 (E-cadherin) and its interaction partners CTNNB1 (beta-catenin), CTNND1 and JUP (gamma-catenin). Under conditions of apoptosis or calcium influx, cleaves CDH1. This promotes the disassembly of the complexes between CDH1 and CTNND1, JUP and CTNNB1, increases the pool of cytoplasmic CTNNB1, and thereby negatively regulates Wnt signaling. Required for normal embryonic brain and skeleton development, and for normal angiogenesis (By similarity). Mediates the proteolytic cleavage of EphB2/CTF1 into EphB2/CTF2. The holoprotein functions as a calcium-leak channel that allows the passive movement of calcium from endoplasmic reticulum to cytosol and is therefore involved in calcium homeostasis. Involved in the regulation of neurite outgrowth. Is a regulator of presynaptic facilitation, spike transmission and synaptic vesicles replenishment in a process that depends on gamma-secretase activity. It acts through the control of SYT7 presynaptic expression (By similarity).
Classification
- Family (Pfam)
- PF01080 Presenilin
- InterPro
- Pept_A22A_PS1, Peptidase_A22A, Preselin/SPP, Presenilin_C
- Functional cluster
- Membrane Transporters & GPCRs
Experimental structures · PDB · 27
- 2KR6 NMR
- 4UIS EM 4.40A
- 5A63 EM 3.40A
- 5FN2 EM 4.20A
- 5FN3 EM 4.10A
- 5FN4 EM 4.00A
- 5FN5 EM 4.30A
- 6IDF EM 2.70A
- 6IYC EM 2.60A
- 6LQG EM 3.10A
- 6LR4 EM 3.00A
- 7C9I EM 3.10A
- … and 15 more
A predicted model is available from AlphaFold.
Gene Ontology · 88
- GO:0016235 aggresome
- GO:0035577 azurophil granule membrane
- GO:0005938 cell cortex
- GO:0009986 cell surface
- GO:0005813 centrosome
- GO:0035253 ciliary rootlet
- GO:0030425 dendrite
- GO:0043198 dendritic shaft
- GO:0031901 early endosome membrane
- GO:0005783 endoplasmic reticulum
- GO:0005789 endoplasmic reticulum membrane
- GO:0070765 gamma-secretase complex
- GO:0098978 glutamatergic synapse
- GO:0005794 Golgi apparatus
- GO:0000139 Golgi membrane
- GO:0030426 growth cone
- GO:0000776 kinetochore
- GO:0016020 membrane
- GO:0045121 membrane raft
- GO:0044233 mitochondria-associated endoplasmic reticulum membrane contact site
- GO:0005743 mitochondrial inner membrane
- GO:0005739 mitochondrion
- GO:0031594 neuromuscular junction
- GO:0043005 neuron projection
- GO:0043025 neuronal cell body
- GO:0031965 nuclear membrane
- GO:0005640 nuclear outer membrane
- GO:0005634 nucleus
- GO:0005886 plasma membrane
- GO:0098794 postsynapse
- GO:0042734 presynaptic membrane
- GO:0032991 protein-containing complex
- GO:0005791 rough endoplasmic reticulum
- GO:0042383 sarcolemma
- GO:0005790 smooth endoplasmic reticulum
- GO:0008021 synaptic vesicle
- GO:0042500 aspartic endopeptidase activity, intramembrane cleaving
- GO:0004190 aspartic-type endopeptidase activity
- GO:0051117 ATPase binding
- GO:0008013 beta-catenin binding
- GO:0045296 cadherin binding
- GO:0005262 calcium channel activity
- GO:0004175 endopeptidase activity
- GO:0070851 growth factor receptor binding
- GO:0060090 molecular adaptor activity
- GO:0030165 PDZ domain binding
- GO:0042987 amyloid precursor protein catabolic process
- GO:0042982 amyloid precursor protein metabolic process
- GO:0034205 amyloid-beta formation
- GO:0006915 apoptotic process
- GO:0048143 astrocyte activation
- GO:0002265 astrocyte activation involved in immune response
- GO:0055074 calcium ion homeostasis
- GO:0098609 cell-cell adhesion
- GO:1904646 cellular response to amyloid-beta
- GO:0021549 cerebellum development
- GO:0006974 DNA damage response
- GO:0032469 endoplasmic reticulum calcium ion homeostasis
- GO:0035556 intracellular signal transduction
- GO:0007611 learning or memory
- GO:0006509 membrane protein ectodomain proteolysis
- GO:0007613 memory
- GO:0043066 negative regulation of apoptotic process
- GO:0010629 negative regulation of gene expression
- GO:0043524 negative regulation of neuron apoptotic process
- GO:0000122 negative regulation of transcription by RNA polymerase II
- GO:2000059 negative regulation of ubiquitin-dependent protein catabolic process
- GO:0003407 neural retina development
- GO:1990535 neuron projection maintenance
- GO:0007220 Notch receptor processing
- GO:0007219 Notch signaling pathway
- GO:1905908 positive regulation of amyloid fibril formation
- GO:0060999 positive regulation of dendritic spine development
- GO:0045893 positive regulation of DNA-templated transcription
- GO:0010628 positive regulation of gene expression
- GO:0045821 positive regulation of glycolytic process
- GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process
- GO:0001921 positive regulation of receptor recycling
- GO:0032760 positive regulation of tumor necrosis factor production
- GO:0140249 protein catabolic process at postsynapse
- GO:0016485 protein processing
- GO:0060828 regulation of canonical Wnt signaling pathway
- GO:0010468 regulation of gene expression
- GO:0010975 regulation of neuron projection development
- GO:0099175 regulation of postsynapse organization
- GO:0098693 regulation of synaptic vesicle cycle
- GO:0043589 skin morphogenesis
- GO:0050808 synapse organization
Disease associations
- Pick disease MONDO:0008243
- semantic dementia MONDO:0010857
- Alzheimer disease 3 MONDO:0011913
- dilated cardiomyopathy 1U MONDO:0013371
- acne inversa, familial, 3 MONDO:0013398
Drugs targeting this protein · 7
- AVAGACESTAT inhibitor
- NIROGACESTAT inhibitor
- TARENFLURBIL modulator
- RG-4733 inhibitor
- NIROGACESTAT HYDROBROMIDE inhibitor
- BEGACESTAT inhibitor
- SEMAGACESTAT inhibitor
Related proteins · sequence + function similarity
- Presenilin-1 1.00
- Presenilin-1 1.00
- Presenilin-1 0.99
- Presenilin-1 0.99
- Presenilin-1 0.99
- Presenilin-1 0.99
- Presenilin-1 0.99
- Presenilin-2 0.96
- Presenilin-2 0.96
- Presenilin-1 0.96
- Presenilin-1 0.95
- Presenilin-2 0.95
Co-cited proteins · studied together in the literature
- Presenilin-2 14 shared papers
- Nicastrin 9 shared papers
- Gamma-secretase subunit PEN-2 8 shared papers
- Gamma-secretase subunit APH-1A 7 shared papers
- Mitochondrial carrier homolog 1 1 shared papers
- Presenilin-1 4 shared papers
- Protein crumbs homolog 2 1 shared papers
- Presenilin-1 1 shared papers
- Presenilin-2 1 shared papers
- Presenilin-1 1 shared papers
- Presenilin-2 1 shared papers
- Delta-like protein 3 1 shared papers
Literature · 139 cited papers
- Recognition of the amyloid precursor protein by human gamma-secretase. Science · 2019
- Structural basis of Notch recognition by human gamma-secretase. Nature · 2019
- PSEN1 p.Thr116Ile variant in two Korean families with young onset Alzheimer's disease. Int. J. Mol. Sci. · 2018
- Novel PSEN1 p.Gly417Ala mutation in a Korean patient with early-onset Alzheimer's disease with parkinsonism. Neurobiol. Aging · 2018
- Phenotypic variability in autosomal dominant familial Alzheimer disease due to the S170F mutation of presenilin-1. Neurodegener. Dis. · 2018
- Neuropathology and biochemistry of early onset familial Alzheimer's disease caused by presenilin-1 missense mutation Thr116Asn. J. Neural Transm. · 2018
- Genetic screening in two Iranian families with early-onset Alzheimer's disease identified a novel PSEN1 mutation. Neurobiol. Aging · 2018
- A novel PSEN1 K311R mutation discovered in Chinese families with late-onset Alzheimer's disease affects amyloid-beta production and tau phosphorylation. J. Alzheimers Dis. · 2017
- Analysis of 138 pathogenic mutations in presenilin-1 on the in vitro production of Abeta42 and Abeta40 peptides by gamma-secretase. Proc. Natl. Acad. Sci. U.S.A. · 2017
- The presenilin 1 p.Gly206Ala mutation is a frequent cause of early-onset Alzheimer's disease in Hispanics in Florida. Am. J. Neurodegener. Dis. · 2016
- Sampling the conformational space of the catalytic subunit of human gamma-secretase. Elife · 2015
- Novel presenilin 1 mutation (Ile408Thr) in an Italian family with late-onset Alzheimer's disease. Neurosci. Lett. · 2016
- … and 127 more in the literature graph