Breast cancer type 1 susceptibility protein
Also known as: BRCA1, RNF53
Function
E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain genomic stability. Regulates centrosomal microtubule nucleation. Required for appropriate cell cycle arrests after ionizing irradiation in both the S-phase and the G2 phase of the cell cycle. Required for FANCD2 targeting to sites of DNA damage. Inhibits lipid synthesis by binding to inactive phosphorylated ACACA and preventing its dephosphorylation. Contributes to homologous recombination repair (HRR) via its direct interaction with PALB2, fine-tunes recombinational repair partly through its modulatory role in the PALB2-dependent loading of BRCA2-RAD51 repair machinery at DNA breaks. Component of the BRCA1-RBBP8 complex which regulates CHEK1 activation and controls cell cycle G2/M checkpoints on DNA damage via BRCA1-mediated ubiquitination of RBBP8. Acts as a transcriptional activator.
Classification
- Family (Pfam)
- PF00533 BRCT, PF12820 BRCT_assoc, PF00097 zf-C3HC4
- InterPro
- BRCA1, BRCA1-associated, BRCA1_serine_dom, BRCT_dom, BRCT_dom_sf, Znf_C3HC4_RING-type, Znf_RING, Znf_RING/FYVE/PHD, Znf_RING_CS
- Functional cluster
- Zinc-Finger & Chromatin Regulatory Proteins
Experimental structures · PDB · 33
- 1JM7 NMR
- 1JNX X-ray 2.50A
- 1N5O X-ray 2.80A
- 1OQA NMR
- 1T15 X-ray 1.85A
- 1T29 X-ray 2.30A
- 1T2U X-ray 2.80A
- 1T2V X-ray 3.30A
- 1Y98 X-ray 2.50A
- 2ING X-ray 3.60A
- 3COJ X-ray 3.21A
- 3K0H X-ray 2.70A
- … and 21 more
A predicted model is available from AlphaFold.
Gene Ontology · 71
- GO:0070531 BRCA1-A complex
- GO:0031436 BRCA1-BARD1 complex
- GO:0005694 chromosome
- GO:0005737 cytoplasm
- GO:0000931 gamma-tubulin ring complex
- GO:0000800 lateral element
- GO:0016604 nuclear body
- GO:0005654 nucleoplasm
- GO:0005634 nucleus
- GO:0005886 plasma membrane
- GO:0032991 protein-containing complex
- GO:1990904 ribonucleoprotein complex
- GO:0000151 ubiquitin ligase complex
- GO:0001741 XY body
- GO:0003684 damaged DNA binding
- GO:0003677 DNA binding
- GO:0019899 enzyme binding
- GO:0140863 histone H2AK127 ubiquitin ligase activity
- GO:0140864 histone H2AK129 ubiquitin ligase activity
- GO:0042802 identical protein binding
- GO:0002039 p53 binding
- GO:0003723 RNA binding
- GO:0070063 RNA polymerase binding
- GO:0000976 transcription cis-regulatory region binding
- GO:0003713 transcription coactivator activity
- GO:0015631 tubulin binding
- GO:0031625 ubiquitin protein ligase binding
- GO:0061649 ubiquitin-modified histone reader activity
- GO:0004842 ubiquitin-protein transferase activity
- GO:0008270 zinc ion binding
- GO:0071681 cellular response to indole-3-methanol
- GO:0071479 cellular response to ionizing radiation
- GO:0071356 cellular response to tumor necrosis factor
- GO:0043009 chordate embryonic development
- GO:0006338 chromatin remodeling
- GO:0007059 chromosome segregation
- GO:0006974 DNA damage response
- GO:0006301 DNA damage tolerance
- GO:0006281 DNA repair
- GO:0110025 DNA strand resection involved in replication fork processing
- GO:0006351 DNA-templated transcription
- GO:0006302 double-strand break repair
- GO:0000724 double-strand break repair via homologous recombination
- GO:0006633 fatty acid biosynthetic process
- GO:0035825 homologous recombination
- GO:0008630 intrinsic apoptotic signaling pathway in response to DNA damage
- GO:0007095 mitotic G2 DNA damage checkpoint signaling
- GO:0044818 mitotic G2/M transition checkpoint
- GO:0045786 negative regulation of cell cycle
- GO:0030308 negative regulation of cell growth
- GO:0046600 negative regulation of centriole replication
- GO:0045892 negative regulation of DNA-templated transcription
- GO:1902042 negative regulation of extrinsic apoptotic signaling pathway via death domain receptors
- GO:0045717 negative regulation of fatty acid biosynthetic process
- GO:0044027 negative regulation of gene expression via chromosomal CpG island methylation
- GO:0033147 negative regulation of intracellular estrogen receptor signaling pathway
- GO:2000378 negative regulation of reactive oxygen species metabolic process
- GO:0045766 positive regulation of angiogenesis
- GO:0045739 positive regulation of DNA repair
- GO:0045893 positive regulation of DNA-templated transcription
- GO:0010628 positive regulation of gene expression
- GO:0045944 positive regulation of transcription by RNA polymerase II
- GO:0010575 positive regulation of vascular endothelial growth factor production
- GO:0051865 protein autoubiquitination
- GO:0085020 protein K6-linked ubiquitination
- GO:0016567 protein ubiquitination
- GO:0051726 regulation of cell cycle
- GO:2000001 regulation of DNA damage checkpoint
- GO:0006282 regulation of DNA repair
- GO:0006357 regulation of transcription by RNA polymerase II
- GO:0010212 response to ionizing radiation
Disease associations
- hereditary breast carcinoma MONDO:0016419
- ovarian cancer MONDO:0008170
- breast-ovarian cancer, familial, susceptibility to, 1 MONDO:0011450
- pancreatic cancer, susceptibility to, 4 MONDO:0013685
- Fanconi anemia, complementation group S MONDO:0054748
Neighborhood · nearest proteins
Related proteins · sequence + function similarity
- Breast cancer type 1 susceptibility protein homolog 1.00
- Breast cancer type 1 susceptibility protein homolog 1.00
- Breast cancer type 1 susceptibility protein homolog 1.00
- Breast cancer type 1 susceptibility protein homolog 0.99
- Breast cancer type 1 susceptibility protein homolog 0.99
- Breast cancer type 1 susceptibility protein homolog 0.98
- Breast cancer type 1 susceptibility protein homolog 0.97
- Breast cancer type 1 susceptibility protein homolog 0.95
- Protein TOPAZ1 0.94
- Protein TOPAZ1 0.94
- Protein TOPAZ1 0.94
- Protein TOPAZ1 0.94
Co-cited proteins · studied together in the literature
- Breast cancer type 2 susceptibility protein 15 shared papers
- BRCA1-associated RING domain protein 1 6 shared papers
- Acetyl-CoA carboxylase 1 4 shared papers
- BRCA1-A complex subunit Abraxas 1 8 shared papers
- 5'-3' DNA helicase ZGRF1 2 shared papers
- DNA endonuclease RBBP8 4 shared papers
- PCNA-associated factor 1 shared papers
- Aurora kinase A 3 shared papers
- F-box only protein 44 1 shared papers
- Proteasome activator complex subunit 3 1 shared papers
- BRCA1-A complex subunit RAP80 6 shared papers
- Serine/threonine-protein kinase Chk2 2 shared papers
Literature · 106 cited papers
- PMID 36400755 Cell. Death. Discov. · 2022
- ZGRF1 promotes end resection of DNA homologous recombination via forming complex with BRCA1/EXO1. Cell. Death. Discov. · 2021
- Homozygous loss of function BRCA1 variant causing a Fanconi-anemia-like phenotype, a clinical report and review of previous patients. Eur. J. Med. Genet. · 2018
- Suggestion of BRCA1 c.5339T>C (p.L1780P) variant confer from 'unknown significance' to 'Likely pathogenic' based on clinical evidence in Korea. Breast · 2017
- Compromised BRCA1-PALB2 interaction is associated with breast cancer risk. Oncogene · 2017
- Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation. Nat. Struct. Mol. Biol. · 2017
- EXD2 promotes homologous recombination by facilitating DNA end resection. Nat. Cell Biol. · 2016
- Structure of BRCA1-BRCT/Abraxas complex reveals phosphorylation-dependent BRCT dimerization at DNA damage sites. Mol. Cell · 2016
- PMID 26341884 J. Biol. Chem. · 2015
- System-wide analysis of SUMOylation dynamics in response to replication stress reveals novel small ubiquitin-like modified target proteins and acceptor lysines relevant for genome stability. Mol. Cell. Proteomics · 2015
- Biallelic mutations in BRCA1 cause a new Fanconi anemia subtype. Cancer Discov. · 2015
- Uncovering global SUMOylation signaling networks in a site-specific manner. Nat. Struct. Mol. Biol. · 2014
- … and 94 more in the literature graph