Glutamate receptor ionotropic, NMDA 1
Also known as: GRIN1, NMDAR1
Function
Component of N-methyl-D-aspartate (NMDA) receptors (NMDARs) that function as heterotetrameric, ligand-gated cation channels with high calcium permeability and voltage-dependent block by Mg(2+). NMDARs participate in synaptic plasticity for learning and memory formation by contributing to the long-term potentiation (LTP). Channel activation requires binding of the neurotransmitter L-glutamate to the GluN2 subunit, glycine or D-serine binding to the GluN1 subunit, plus membrane depolarization to eliminate channel inhibition by Mg(2+). NMDARs mediate simultaneously the potassium efflux and the influx of calcium and sodium (By similarity). Each GluN2 or GluN3 subunit confers differential attributes to channel properties, including activation, deactivation and desensitization kinetics, pH sensitivity, Ca2(+) permeability, and binding to allosteric modulators.
Classification
- Family (Pfam)
- PF01094 ANF_receptor, PF00060 Lig_chan, PF10613 Lig_chan-Glu_bd
- InterPro
- ANF_lig-bd_rcpt, Glu/Gly-bd, Iono_Glu_rcpt_met, Ionotropic_Glu_rcpt, Iontro_rcpt_C, NMDA1-like_ligand-bd, NMDA1-like_N, Peripla_BP_I
- Functional cluster
- Mixed Regulatory & Membrane Proteins
Experimental structures · PDB · 71
- 2HQW X-ray 1.90A
- 2NR1 NMR
- 3BYA X-ray 1.85A
- 5H8F X-ray 1.81A
- 5H8H X-ray 2.23A
- 5H8N X-ray 2.50A
- 5H8Q X-ray 1.90A
- 5I2K X-ray 2.86A
- 5I2N X-ray 2.12A
- 5KCJ X-ray 2.09A
- 5KDT X-ray 2.44A
- 5TP9 X-ray 2.40A
- … and 59 more
A predicted model is available from AlphaFold.
Gene Ontology · 56
- GO:0009986 cell surface
- GO:0005737 cytoplasm
- GO:0030425 dendrite
- GO:0043197 dendritic spine
- GO:0005789 endoplasmic reticulum membrane
- GO:0060076 excitatory synapse
- GO:0043005 neuron projection
- GO:0098878 neurotransmitter receptor complex
- GO:0017146 NMDA selective glutamate receptor complex
- GO:0005886 plasma membrane
- GO:0014069 postsynaptic density
- GO:0098839 postsynaptic density membrane
- GO:0045211 postsynaptic membrane
- GO:0042734 presynaptic membrane
- GO:0045202 synapse
- GO:0043083 synaptic cleft
- GO:0097060 synaptic membrane
- GO:0008021 synaptic vesicle
- GO:0043195 terminal bouton
- GO:0001540 amyloid-beta binding
- GO:0005509 calcium ion binding
- GO:0005516 calmodulin binding
- GO:0016595 glutamate binding
- GO:0022849 glutamate-gated calcium ion channel activity
- GO:0016594 glycine binding
- GO:0160212 glycine-gated cation channel activity
- GO:0015276 ligand-gated monoatomic ion channel activity
- GO:0015280 ligand-gated sodium channel activity
- GO:0004972 NMDA glutamate receptor activity
- GO:0044877 protein-containing complex binding
- GO:0038023 signaling receptor activity
- GO:0007420 brain development
- GO:0055074 calcium ion homeostasis
- GO:0097553 calcium ion transmembrane import into cytosol
- GO:0070588 calcium ion transmembrane transport
- GO:0007268 chemical synaptic transmission
- GO:0098976 excitatory chemical synaptic transmission
- GO:0060079 excitatory postsynaptic potential
- GO:0035235 ionotropic glutamate receptor signaling pathway
- GO:0098655 monoatomic cation transmembrane transport
- GO:0006812 monoatomic cation transport
- GO:0010524 positive regulation of calcium ion transport into cytosol
- GO:2000463 positive regulation of excitatory postsynaptic potential
- GO:1903428 positive regulation of reactive oxygen species biosynthetic process
- GO:0051968 positive regulation of synaptic transmission, glutamatergic
- GO:0045944 positive regulation of transcription by RNA polymerase II
- GO:0018964 propylene metabolic process
- GO:0051290 protein heterotetramerization
- GO:0042391 regulation of membrane potential
- GO:1904062 regulation of monoatomic cation transmembrane transport
- GO:0048168 regulation of neuronal synaptic plasticity
- GO:0048167 regulation of synaptic plasticity
- GO:0045471 response to ethanol
- GO:1905429 response to glycine
- GO:0035725 sodium ion transmembrane transport
- GO:0008542 visual learning
Disease associations
Drugs targeting this protein · 24
- FELBAMATE antagonist
- ORPHENADRINE CITRATE antagonist
- ORPHENADRINE HYDROCHLORIDE antagonist
- GW468816 antagonist
- NEBOGLAMINE positive allosteric modulator
- AMANTADINE HYDROCHLORIDE antagonist
- MEMANTINE HYDROCHLORIDE negative allosteric modulator
- KETAMINE HYDROCHLORIDE negative allosteric modulator
- TRAXOPRODIL antagonist
- RADIPRODIL antagonist
- ACAMPROSATE CALCIUM antagonist
- RISLENEMDAZ antagonist
- NERAMEXANE MESYLATE antagonist
- RALFINAMIDE antagonist
- DELUCEMINE antagonist
- ESKETAMINE HYDROCHLORIDE negative allosteric modulator
- RAPASTINEL partial agonist
- EVT-101 antagonist
- AV-101 antagonist
- ESKETAMINE negative allosteric modulator
- APIMOSTINEL partial agonist
- CNS-5161 blocker
- PERZINFOTEL antagonist
- LANICEMINE blocker
Related proteins · sequence + function similarity
- Glutamate receptor ionotropic, NMDA 1 1.00
- Glutamate receptor ionotropic, NMDA 1 1.00
- Glutamate receptor ionotropic, NMDA 1 1.00
- Glutamate receptor ionotropic, NMDA 1 0.99
- Gamma-aminobutyric acid type B receptor subunit 1 0.85
- Gamma-aminobutyric acid type B receptor subunit 1 0.85
- Gamma-aminobutyric acid type B receptor subunit 1 0.84
- Endoplasmic reticulum-Golgi intermediate compartment protein 1 0.71
- Endoplasmic reticulum-Golgi intermediate compartment protein 1 0.71
- Gephyrin 0.69
- Sodium/hydrogen exchanger 8 0.68
- Gephyrin 0.68
Co-cited proteins · studied together in the literature
- Glutamate receptor ionotropic, NMDA 2A 8 shared papers
- Glutamate receptor ionotropic, NMDA 2C 3 shared papers
- Glutamate receptor ionotropic, NMDA 2B 8 shared papers
- Glutamate receptor ionotropic, NMDA 2D 5 shared papers
- Glutamate receptor ionotropic, NMDA 3A 2 shared papers
- Mediator of RNA polymerase II transcription subunit 13-like 1 shared papers
- Glutamate receptor ionotropic, NMDA 2C 3 shared papers
- Acetylcholine receptor subunit delta 1 shared papers
- Acetylcholine receptor subunit delta 1 shared papers
- Band 4.1-like protein 1 1 shared papers
- Voltage-dependent calcium channel gamma-2 subunit 1 shared papers
- Glutamate receptor ionotropic, NMDA 1 2 shared papers
Literature · 33 cited papers
- Structure and function of GluN1-3A NMDA receptor excitatory glycine receptor channel. Sci. Adv. · 2024
- De novo GRIN variants in M3 helix associated with neurological disorders control channel gating of NMDA receptor. Cell. Mol. Life Sci. · 2024
- KCTD13-mediated ubiquitination and degradation of GluN1 regulates excitatory synaptic transmission and seizure susceptibility. Cell Death Differ. · 2023
- Distinct structure and gating mechanism in diverse NMDA receptors with GluN2C and GluN2D subunits. Nat. Struct. Mol. Biol. · 2023
- Structural insights into assembly and function of GluN1-2C, GluN1-2A-2C, and GluN1-2D NMDARs. Mol. Cell · 2022
- A homozygous GRIN1 null variant causes a more severe phenotype of early infantile epileptic encephalopathy. Am. J. Med. Genet. A · 2022
- Structural basis of ketamine action on human NMDA receptors. Nature · 2021
- Gating mechanism and a modulatory niche of human GluN1-GluN2A NMDA receptors. Neuron · 2021
- De novo GRIN1 mutations: An emerging cause of severe early infantile encephalopathy. Eur. J. Med. Genet. · 2017
- GRIN1 mutation associated with intellectual disability alters NMDA receptor trafficking and function. J. Hum. Genet. · 2017
- Functional evaluation of a de novo GRIN2A mutation identified in a patient with profound global developmental delay and refractory epilepsy. Mol. Pharmacol. · 2017
- GluN2A-Selective Pyridopyrimidinone Series of NMDAR Positive Allosteric Modulators with an Improved in Vivo Profile. ACS Med. Chem. Lett. · 2017
- … and 21 more in the literature graph