Serine/threonine-protein kinase mTOR
Also known as: FRAP, FRAP1, FRAP2, MTOR, RAFT1, RAPT1
Function
Serine/threonine protein kinase which is a central regulator of cellular metabolism, growth and survival in response to hormones, growth factors, nutrients, energy and stress signals. MTOR directly or indirectly regulates the phosphorylation of at least 800 proteins. Functions as part of 2 structurally and functionally distinct signaling complexes mTORC1 and mTORC2 (mTOR complex 1 and 2). In response to nutrients, growth factors or amino acids, mTORC1 is recruited to the lysosome membrane and promotes protein, lipid and nucleotide synthesis by phosphorylating key regulators of mRNA translation and ribosome synthesis. This includes phosphorylation of EIF4EBP1 and release of its inhibition toward the elongation initiation factor 4E (eiF4E). Moreover, phosphorylates and activates RPS6KB1 and RPS6KB2 that promote protein synthesis by modulating the activity of their downstream targets including ribosomal protein S6, eukaryotic translation initiation factor EIF4B, and the inhibitor of translation initiation PDCD4. Stimulates the pyrimidine biosynthesis pathway, both by acute regulation through RPS6KB1-mediated phosphorylation of the biosynthetic enzyme CAD, and delayed regulation, through transcriptional enhancement of the pentose phosphate pathway which produces 5-phosphoribosyl-1-pyrophosphate (PRPP), an allosteric activator of CAD at a later step in synthesis, this function is dependent on the mTORC1 complex. Regulates ribosome synthesis by activating RNA polymerase III-dependent transcription through phosphorylation and inhibition of MAF1 an RNA polymerase III-repressor. Activates dormant ribosomes by mediating phosphorylation of SERBP1, leading to SERBP1 inactivation and reactivation of translation. In parallel to protein synthesis, also regulates lipid synthesis through SREBF1/SREBP1 and LPIN1. To maintain energy homeostasis mTORC1 may also regulate mitochondrial biogenesis through regulation of PPARGC1A (By similarity). In the same time, mTORC1 inhibits catabolic pathways: negatively regulates autophagy through phosphorylation of ULK1. Under nutrient sufficiency, phosphorylates ULK1 at 'Ser-758', disrupting the interaction with AMPK and preventing activation of ULK1. Also prevents autophagy through phosphorylation of the autophagy inhibitor DAP. Also prevents autophagy by phosphorylating RUBCNL/Pacer under nutrient-rich conditions. Prevents autophagy by mediating phosphorylation of AMBRA1, thereby inhibiting AMBRA1 ability to mediate ubiquitination of ULK1 and interaction between AMBRA1 and PPP2CA. mTORC1 exerts a feedback control on upstream growth factor signaling that includes phosphorylation and activation of GRB10 a INSR-dependent signaling suppressor. Among other potential targets mTORC1 may phosphorylate CLIP1 and regulate microtubules. The mTORC1 complex is inhibited in response to starvation and amino acid depletion. The non-canonical mTORC1 complex, which acts independently of RHEB, specifically mediates phosphorylation of MiT/TFE factors MITF, TFEB and TFE3 in the presence of nutrients, promoting their cytosolic retention and inactivation. Upon starvation or lysosomal stress, inhibition of mTORC1 induces dephosphorylation and nuclear translocation of TFEB and TFE3, promoting their transcription factor activity. The mTORC1 complex regulates pyroptosis in macrophages by promoting GSDMD oligomerization. MTOR phosphorylates RPTOR which in turn inhibits mTORC1 (By similarity). As part of the mTORC2 complex, MTOR transduces signals from growth factors to pathways involved in proliferation, cytoskeletal organization, lipogenesis and anabolic output. In response to growth factors, mTORC2 phosphorylates and activates AGC protein kinase family members, including AKT (AKT1, AKT2 and AKT3), PKC (PRKCA, PRKCB and PRKCE) and SGK1. In contrast to mTORC1, mTORC2 is nutrient-insensitive. mTORC2 plays a critical role in AKT1 activation by mediating phosphorylation of different sites depending on the context, such as 'Thr-450', 'Ser-473', 'Ser-477' or 'Thr-479', facilitating the phosphorylation of the activation loop of AKT1 on 'Thr-308' by PDPK1/PDK1 which is a prerequisite for full activation. mTORC2 also regulates the phosphorylation of SGK1 at 'Ser-422'. mTORC2 may regulate the actin cytoskeleton, through phosphorylation of PRKCA, PXN and activation of the Rho-type guanine nucleotide exchange factors RHOA and RAC1A or RAC1B. The mTORC2 complex also phosphorylates various proteins involved in insulin signaling, such as FBXW8 and IGF2BP1 (By similarity). May also regulate insulin signaling by acting as a tyrosine protein kinase that catalyzes phosphorylation of IGF1R and INSR; additional evidence are however required to confirm this result in vivo. Regulates osteoclastogenesis by adjusting the expression of CEBPB isoforms (By similarity). Plays an important regulatory role in the circadian clock function; regulates period length and rhythm amplitude of the suprachiasmatic nucleus (SCN) and liver clocks (By similarity).
Classification
- Family (Pfam)
- PF02259 FAT, PF02260 FATC, PF08771 FRB_dom, PF23593 HEAT_ATR, PF11865 mTOR_dom, PF00454 PI3_PI4_kinase
- InterPro
- ARM-like, ARM-type_fold, DDR_Repair_Kinase, FATC_dom, FRB_dom, FRB_sf, HEAT_ATR, Kinase-like_dom_sf, mTOR_dom, PI3/4_kinase_cat_dom, PI3/4_kinase_cat_sf, PI3/4_kinase_CS, PIK-rel_kinase_FAT, PIK_FAT, TOR_cat, TPR-like_helical_dom_sf
- Functional cluster
- S-Adenosylmethionine Synthases & related
Experimental structures · PDB · 61
- 1AUE X-ray 2.33A
- 1FAP X-ray 2.70A
- 1NSG X-ray 2.20A
- 2FAP X-ray 2.20A
- 2GAQ NMR
- 2NPU NMR
- 2RSE NMR
- 3FAP X-ray 1.85A
- 3JBZ EM 28.00A
- 4DRH X-ray 2.30A
- 4DRI X-ray 1.45A
- 4DRJ X-ray 1.80A
- … and 49 more
A predicted model is available from AlphaFold.
Gene Ontology · 99
- GO:0005737 cytoplasm
- GO:0005829 cytosol
- GO:0030425 dendrite
- GO:0012505 endomembrane system
- GO:0005783 endoplasmic reticulum
- GO:0005789 endoplasmic reticulum membrane
- GO:0005794 Golgi apparatus
- GO:0000139 Golgi membrane
- GO:0005765 lysosomal membrane
- GO:0005764 lysosome
- GO:0016020 membrane
- GO:0005741 mitochondrial outer membrane
- GO:0005635 nuclear envelope
- GO:0005654 nucleoplasm
- GO:0005634 nucleus
- GO:0045335 phagocytic vesicle
- GO:0005886 plasma membrane
- GO:0016605 PML body
- GO:0031931 TORC1 complex
- GO:0031932 TORC2 complex
- GO:0005524 ATP binding
- GO:0042802 identical protein binding
- GO:0000822 inositol hexakisphosphate binding
- GO:0004715 non-membrane spanning protein tyrosine kinase activity
- GO:0051219 phosphoprotein binding
- GO:0004672 protein kinase activity
- GO:0106310 protein serine kinase activity
- GO:0004674 protein serine/threonine kinase activity
- GO:0004713 protein tyrosine kinase activity
- GO:0043022 ribosome binding
- GO:0001002 RNA polymerase III type 1 promoter sequence-specific DNA binding
- GO:0001003 RNA polymerase III type 2 promoter sequence-specific DNA binding
- GO:0001006 RNA polymerase III type 3 promoter sequence-specific DNA binding
- GO:0001156 TFIIIC-class transcription factor complex binding
- GO:0044325 transmembrane transporter binding
- GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process
- GO:0043276 anoikis
- GO:0048266 behavioral response to pain
- GO:0055006 cardiac cell development
- GO:0034198 cellular response to amino acid starvation
- GO:0071230 cellular response to amino acid stimulus
- GO:0071456 cellular response to hypoxia
- GO:0032869 cellular response to insulin stimulus
- GO:0071233 cellular response to L-leucine
- GO:1990253 cellular response to leucine starvation
- GO:0061431 cellular response to methionine
- GO:0031670 cellular response to nutrient
- GO:0031669 cellular response to nutrient levels
- GO:0071470 cellular response to osmotic stress
- GO:0009267 cellular response to starvation
- GO:0007010 cytoskeleton organization
- GO:0006974 DNA damage response
- GO:0006954 inflammatory response
- GO:0043066 negative regulation of apoptotic process
- GO:0010507 negative regulation of autophagy
- GO:0046627 negative regulation of insulin receptor signaling pathway
- GO:1905672 negative regulation of lysosome organization
- GO:0016242 negative regulation of macroautophagy
- GO:1900181 negative regulation of protein localization to nucleus
- GO:0019228 neuronal action potential
- GO:0043491 phosphatidylinositol 3-kinase/protein kinase B signal transduction
- GO:0030307 positive regulation of cell growth
- GO:1904690 positive regulation of cytoplasmic translational initiation
- GO:0010718 positive regulation of epithelial to mesenchymal transition
- GO:0045821 positive regulation of glycolytic process
- GO:0051549 positive regulation of keratinocyte migration
- GO:0046889 positive regulation of lipid biosynthetic process
- GO:1905857 positive regulation of pentose-phosphate shunt
- GO:0051897 positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction
- GO:0045860 positive regulation of protein kinase activity
- GO:0062027 positive regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process
- GO:0045945 positive regulation of transcription by RNA polymerase III
- GO:1901838 positive regulation of transcription of nucleolar large rRNA by RNA polymerase I
- GO:0045727 positive regulation of translation
- GO:0045948 positive regulation of translational initiation
- GO:2000060 positive regulation of ubiquitin-dependent protein catabolic process
- GO:1903691 positive regulation of wound healing, spreading of epidermal cells
- GO:0006468 protein phosphorylation
- GO:0050821 protein stabilization
- GO:0032956 regulation of actin cytoskeleton organization
- GO:2000785 regulation of autophagosome assembly
- GO:0001558 regulation of cell growth
- GO:0008361 regulation of cell size
- GO:1900034 regulation of cellular response to heat
- GO:0042752 regulation of circadian rhythm
- GO:1904059 regulation of locomotor rhythm
- GO:1905671 regulation of lysosome organization
- GO:0016241 regulation of macroautophagy
- GO:0045670 regulation of osteoclast differentiation
- GO:1901796 regulation of signal transduction by p53 class mediator
- GO:0043200 response to amino acid
- GO:0009408 response to heat
- GO:0031667 response to nutrient levels
- GO:0031295 T cell costimulation
- GO:0002296 T-helper 1 cell lineage commitment
- GO:0031929 TOR signaling
- GO:0038202 TORC1 signaling
- GO:0038203 TORC2 signaling
- GO:0097700 vascular endothelial cell response to laminar fluid shear stress
Disease associations
Drugs targeting this protein · 23
- PF-04691502 inhibitor
- OMIPALISIB inhibitor
- PKI-179 inhibitor
- PERHEXILINE MALEATE inhibitor
- AZD-8055 inhibitor
- DACTOLISIB inhibitor
- APITOLISIB inhibitor
- RIDAFOROLIMUS inhibitor
- PALOMID-529 inhibitor
- SF-1126 inhibitor
- RG-7603 inhibitor
- VISTUSERTIB inhibitor
- OSI-027 inhibitor
- VS-5584 inhibitor
- BGT-226 inhibitor
- SAPANISERTIB inhibitor
- VOXTALISIB inhibitor
- ONATASERTIB inhibitor
- CC-115 inhibitor
- SAMOTOLISIB inhibitor
- PANULISIB inhibitor
- INDOXIMOD activator
- GEDATOLISIB inhibitor
Related proteins · sequence + function similarity
- Serine/threonine-protein kinase mTOR 1.00
- Serine/threonine-protein kinase mTOR 1.00
- Proteasome adapter and scaffold protein ECM29 0.87
- Proteasome adapter and scaffold protein ECM29 0.86
- Proteasome adapter and scaffold protein ECM29 0.86
- Serine/threonine-protein kinase mTor 0.80
- Serine/threonine-protein kinase tor 0.80
- Cullin-associated NEDD8-dissociated protein 1 0.79
- Cullin-associated NEDD8-dissociated protein 1 0.79
- Cullin-associated NEDD8-dissociated protein 1 0.79
- Cullin-associated NEDD8-dissociated protein 1 0.79
- Cullin-associated NEDD8-dissociated protein 1 0.79
Co-cited proteins · studied together in the literature
- Target of rapamycin complex subunit LST8 19 shared papers
- Proline-rich AKT1 substrate 1 5 shared papers
- Regulatory-associated protein of mTOR 19 shared papers
- Rapamycin-insensitive companion of mTOR 14 shared papers
- Serine/threonine-protein kinase mTOR 11 shared papers
- Multifunctional protein CAD 2 shared papers
- Ribosomal protein S6 kinase beta-2 2 shared papers
- Serine/threonine-protein kinase mTOR 1 shared papers
- Death-associated protein 1 1 shared papers
- Transcription factor EB 6 shared papers
- Target of rapamycin complex 2 subunit MAPKAP1 9 shared papers
- Ribosomal protein S6 kinase beta-1 6 shared papers
Literature · 122 cited papers
- The tRNA-GCN2-FBXO22-axis-mediated mTOR ubiquitination senses amino acid insufficiency. Cell Metab. · 2023
- Lysosomal cyst(e)ine storage potentiates tolerance to oxidative stress in cancer cells. Mol. Cell · 2023
- De novo missense variants in RRAGC lead to a fatal mTORopathy of early childhood. Genet. Med. · 2023
- Structure of the lysosomal mTORC1-TFEB-Rag-Ragulator megacomplex. Nature · 2023
- TORC1 phosphorylates and inhibits the ribosome preservation factor Stm1 to activate dormant ribosomes. EMBO J. · 2023
- A central role for regulated protein stability in the control of TFE3 and MITF by nutrients. Mol. Cell · 2023
- Interactions between mTORC2 core subunits Rictor and mSin1 dictate selective and context-dependent phosphorylation of substrate kinases SGK1 and Akt. J. Biol. Chem. · 2022
- TSPAN8 alleviates high glucose-induced apoptosis and autophagy via targeting mTORC2. Cell Biol. Int. · 2022
- SNAT7 regulates mTORC1 via macropinocytosis. Proc. Natl. Acad. Sci. U.S.A. · 2022
- Bipartite binding and partial inhibition links DEPTOR and mTOR in a mutually antagonistic embrace. Elife · 2021
- Regulation of human mTOR complexes by DEPTOR. Elife · 2021
- Control of gasdermin D oligomerization and pyroptosis by the Ragulator-Rag-mTORC1 pathway. Cell · 2021
- … and 110 more in the literature graph