NACHT, LRR and PYD domains-containing protein 3
Also known as: Cias1, Mmig1, Nalp3, Nlrp3, Pypaf1
Function
Sensor component of the NLRP3 inflammasome, which mediates inflammasome activation in response to defects in membrane integrity, leading to secretion of inflammatory cytokines IL1B and IL18 and pyroptosis. In response to pathogens and other damage-associated signals that affect the integrity of membranes, initiates the formation of the inflammasome polymeric complex composed of NLRP3, CASP1 and PYCARD/ASC. Recruitment of pro-caspase-1 (proCASP1) to the NLRP3 inflammasome promotes caspase-1 (CASP1) activation, which subsequently cleaves and activates inflammatory cytokines IL1B and IL18 and gasdermin-D (GSDMD), promoting cytokine secretion and pyroptosis. Activation of NLRP3 inflammasome is also required for HMGB1 secretion; stimulating inflammatory responses. Involved in the homeostatic wound healing response to tissue injury, a multistep cascade that guides neutrophil migration to necrotic sites while avoiding collateral damage of healthy tissues. ATP released from necrotic cells triggers activation of NLRP3 inflammasome through P2RX7 signaling leading to neutrophil adhesion to the vascular endothelium close to the injury site. Under resting conditions, ADP-bound NLRP3 is autoinhibited (By similarity). NLRP3 activation stimuli include extracellular ATP, nigericin, reactive oxygen species, crystals of monosodium urate or cholesterol, amyloid-beta fibers, environmental or industrial particles and nanoparticles, such as asbestos, silica, aluminum salts, cytosolic dsRNA, etc. Almost all stimuli trigger intracellular K(+) efflux. These stimuli lead to membrane perturbation and activation of NLRP3 (By similarity). Upon activation, NLRP3 is transported to microtubule organizing center (MTOC), where it is unlocked by NEK7, leading to its relocalization to dispersed trans-Golgi network (dTGN) vesicle membranes and formation of an active inflammasome complex. Associates with dTGN vesicle membranes by binding to phosphatidylinositol 4-phosphate (PtdIns4P). Shows ATPase activity.
Classification
- Family (Pfam)
- PF14484 FISNA, PF13516 LRR_6, PF05729 NACHT, PF17776 NLRC4_HD2, PF02758 PYRIN, PF17779 WHD_NOD2
- InterPro
- DAPIN, DEATH-like_dom_sf, Leu-rich_rpt, LRR_dom_sf, NACHT-assoc, NACHT_NTPase, NLRP_HD2, NLRP_innate_immun_reg, NOD1/2_WH, P-loop_NTPase
- Functional cluster
- Immunoglobulin & Immune-Response Proteins
Experimental structures · PDB · 2
A predicted model is available from AlphaFold.
Gene Ontology · 65
- GO:0061702 canonical inflammasome complex
- GO:0005737 cytoplasm
- GO:0005829 cytosol
- GO:0005783 endoplasmic reticulum
- GO:0005576 extracellular region
- GO:0000139 Golgi membrane
- GO:0031021 interphase microtubule organizing center
- GO:0016020 membrane
- GO:0005815 microtubule organizing center
- GO:0005739 mitochondrion
- GO:0072559 NLRP3 inflammasome complex
- GO:0005634 nucleus
- GO:0043531 ADP binding
- GO:0005524 ATP binding
- GO:0016887 ATP hydrolysis activity
- GO:0140608 cysteine-type endopeptidase activator activity
- GO:0140297 DNA-binding transcription factor binding
- GO:0042802 identical protein binding
- GO:0060090 molecular adaptor activity
- GO:0140693 molecular condensate scaffold activity
- GO:0140299 molecular sensor activity
- GO:1901981 phosphatidylinositol phosphate binding
- GO:0070273 phosphatidylinositol-4-phosphate binding
- GO:0030674 protein-macromolecule adaptor activity
- GO:0043565 sequence-specific DNA binding
- GO:0035591 signaling adaptor activity
- GO:0002526 acute inflammatory response
- GO:0071222 cellular response to lipopolysaccharide
- GO:0071224 cellular response to peptidoglycan
- GO:0098586 cellular response to virus
- GO:0050830 defense response to Gram-positive bacterium
- GO:0051607 defense response to virus
- GO:0009595 detection of biotic stimulus
- GO:0006351 DNA-templated transcription
- GO:0006954 inflammatory response
- GO:0045087 innate immune response
- GO:0070498 interleukin-1-mediated signaling pathway
- GO:0035655 interleukin-18-mediated signaling pathway
- GO:0002674 negative regulation of acute inflammatory response
- GO:0050728 negative regulation of inflammatory response
- GO:0032691 negative regulation of interleukin-1 beta production
- GO:1901223 negative regulation of non-canonical NF-kappaB signal transduction
- GO:0044546 NLRP3 inflammasome complex assembly
- GO:0007231 osmosensory signaling pathway
- GO:0002221 pattern recognition receptor signaling pathway
- GO:0002720 positive regulation of cytokine production involved in immune response
- GO:0050729 positive regulation of inflammatory response
- GO:0032731 positive regulation of interleukin-1 beta production
- GO:0032736 positive regulation of interleukin-13 production
- GO:0032741 positive regulation of interleukin-18 production
- GO:0032753 positive regulation of interleukin-4 production
- GO:0032754 positive regulation of interleukin-5 production
- GO:1900227 positive regulation of NLRP3 inflammasome complex assembly
- GO:1901224 positive regulation of non-canonical NF-kappaB signal transduction
- GO:2000321 positive regulation of T-helper 17 cell differentiation
- GO:2000553 positive regulation of T-helper 2 cell cytokine production
- GO:0045630 positive regulation of T-helper 2 cell differentiation
- GO:0045944 positive regulation of transcription by RNA polymerase II
- GO:0002830 positive regulation of type 2 immune response
- GO:0051260 protein homooligomerization
- GO:0051604 protein maturation
- GO:0009306 protein secretion
- GO:0070269 pyroptotic inflammatory response
- GO:0050727 regulation of inflammatory response
- GO:0045471 response to ethanol
Neighborhood · nearest proteins
Related proteins · sequence + function similarity
- NACHT, LRR and PYD domains-containing protein 3 1.00
- NACHT, LRR and PYD domains-containing protein 3 0.99
- NACHT, LRR and PYD domains-containing protein 3 0.99
- NACHT, LRR and PYD domains-containing protein 3 0.99
- NACHT, LRR and PYD domains-containing protein 14 0.96
- NACHT, LRR and PYD domains-containing protein 12 0.96
- NACHT, LRR and PYD domains-containing protein 12 0.95
- NACHT, LRR and PYD domains-containing protein 4 0.95
- NACHT, LRR and PYD domains-containing protein 2 0.95
- NACHT, LRR and PYD domains-containing protein 13 0.94
- NACHT, LRR and PYD domains-containing protein 9 0.94
- NACHT, LRR and PYD domains-containing protein 9 0.94
Co-cited proteins · studied together in the literature
- NACHT, LRR and PYD domains-containing protein 3 20 shared papers
- Serine/threonine-protein kinase Nek7 3 shared papers
- Interleukin-1 beta 1 shared papers
- Lys-63-specific deubiquitinase BRCC36 2 shared papers
- Extracellular calcium-sensing receptor 1 shared papers
- ATP-dependent RNA helicase DDX3X 1 shared papers
- E3 ubiquitin-protein ligase TRIM50 1 shared papers
- Interferon regulatory factor 4 1 shared papers
- Serine/threonine-protein kinase D1 1 shared papers
- Adenylate cyclase type 7 1 shared papers
- Hexokinase-1 1 shared papers
- Hexokinase-1 1 shared papers
Literature · 49 cited papers
- Eukaryotic ADCY7 catalyzes the production of c-di-AMP to activate the NLRP3 inflammasome. Nat. Chem. Biol. · 2025
- Consecutive palmitoylation and phosphorylation orchestrates NLRP3 membrane trafficking and inflammasome activation. Mol. Cell · 2024
- The orphan receptor Nur77 binds cytoplasmic LPS to activate the non-canonical NLRP3 inflammasome. Immunity · 2023
- TRIM50 promotes NLRP3 inflammasome activation by directly inducing NLRP3 oligomerization. EMBO Rep. · 2022
- Structural basis for the oligomerization-mediated regulation of NLRP3 inflammasome activation. Proc. Natl. Acad. Sci. U.S.A. · 2022
- NLRP3 cages revealed by full-length mouse NLRP3 structure control pathway activation. Cell · 2021
- NLRP3 phosphorylation in its LRR domain critically regulates inflammasome assembly. Nat. Commun. · 2021
- BTK operates a phospho-tyrosine switch to regulate NLRP3 inflammasome activity. J. Exp. Med. · 2021
- SARS-CoV-2 N protein promotes NLRP3 inflammasome activation to induce hyperinflammation. Nat. Commun. · 2021
- DDX3X acts as a live-or-die checkpoint in stressed cells by regulating NLRP3 inflammasome. Nature · 2019
- NLRP3 lacking the leucine-rich repeat domain can be fully activated via the canonical inflammasome pathway. Nat. Commun. · 2018
- PtdIns4P on dispersed trans-Golgi network mediates NLRP3 inflammasome activation. Nature · 2018
- … and 37 more in the literature graph