Large ribosomal subunit protein eL13
Also known as: BBC1, RPL13
Function
Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules (Probable). The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain (Probable). The nascent polypeptides leave the ribosome through a tunnel in the LSU and interact with protein factors that function in enzymatic processing, targeting, and the membrane insertion of nascent chains at the exit of the ribosomal tunnel (Probable). As part of the LSU, it is probably required for its formation and the maturation of rRNAs. Plays a role in bone development.
Classification
- Family (Pfam)
- PF01294 Ribosomal_L13e
- InterPro
- Ribosomal_eL13, Ribosomal_eL13_CS
- Functional cluster
- Membrane Translocases & Channels
Experimental structures · PDB · 153
- 4UG0 EM
- 4V6X EM 5.00A
- 5AJ0 EM 3.50A
- 5LKS EM 3.60A
- 5T2C EM 3.60A
- 6IP5 EM 3.90A
- 6IP6 EM 4.50A
- 6IP8 EM 3.90A
- 6LQM EM 3.09A
- 6LSR EM 3.13A
- 6LSS EM 3.23A
- 6LU8 EM 3.13A
- … and 141 more
A predicted model is available from AlphaFold.
Gene Ontology · 17
- GO:0005737 cytoplasm
- GO:0005829 cytosol
- GO:0022625 cytosolic large ribosomal subunit
- GO:0022626 cytosolic ribosome
- GO:0005783 endoplasmic reticulum
- GO:0016020 membrane
- GO:0005730 nucleolus
- GO:0005634 nucleus
- GO:0045202 synapse
- GO:0003723 RNA binding
- GO:0003735 structural constituent of ribosome
- GO:0060348 bone development
- GO:0002181 cytoplasmic translation
- GO:1901740 negative regulation of myoblast fusion
- GO:0007283 spermatogenesis
- GO:0006941 striated muscle contraction
- GO:0006412 translation
Disease associations
- spondyloepimetaphyseal dysplasia, Isidor-Toutain type MONDO:0032885
Drugs targeting this protein · 2
- CYCLOHEXIMIDE inhibitor
- ATALUREN modulator
Related proteins · sequence + function similarity
- Large ribosomal subunit protein eL13 0.99
- Large ribosomal subunit protein eL13 0.99
- Large ribosomal subunit protein eL13 0.99
- Large ribosomal subunit protein eL13 0.99
- Large ribosomal subunit protein eL13 0.99
- Large ribosomal subunit protein eL13 0.97
- Large ribosomal subunit protein eL13 0.97
- Large ribosomal subunit protein eL13 0.96
- Large ribosomal subunit protein eL13 0.91
- Large ribosomal subunit protein eL13 0.87
- Large ribosomal subunit protein eL13x 0.87
- Large ribosomal subunit protein eL13B 0.86
Literature · 19 cited papers
- Structural snapshots of human pre-60S ribosomal particles before and after nuclear export. Nat. Commun. · 2020
- RPL13 variants cause spondyloepimetaphyseal dysplasia with severe short stature. Am. J. Hum. Genet. · 2019
- Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation. Nat. Struct. Mol. Biol. · 2017
- N-terminome analysis of the human mitochondrial proteome. Proteomics · 2015
- Mapping of SUMO sites and analysis of SUMOylation changes induced by external stimuli. Proc. Natl. Acad. Sci. U.S.A. · 2014
- A new system for naming ribosomal proteins. Curr. Opin. Struct. Biol. · 2014
- Structures of the human and Drosophila 80S ribosome. Nature · 2013
- Toward a comprehensive characterization of a human cancer cell phosphoproteome. J. Proteome Res. · 2013
- System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation. Sci. Signal. · 2011
- Initial characterization of the human central proteome. BMC Syst. Biol. · 2011
- Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis. Sci. Signal. · 2010
- Lysine acetylation targets protein complexes and co-regulates major cellular functions. Science · 2009
- … and 7 more in the literature graph